BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B08LP1|AL427117
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1127 1403 0.0
3x_Contig1044 419 e-117
>3x_Contig1127
Length = 4949
Score = 1403 bits (707), Expect = 0.0
Identities = 722/727 (99%), Gaps = 1/727 (0%)
Strand = Plus / Minus
Query: 245 ttattcaaactattggatcagataacgtgaagaacaccgaagcagaactggatcaccaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4928 ttattcaaactattggatcagataacgtgaagaacaccgaagcagaactggatcaccaca 4869
Query: 305 ctgataacggatttaacccaacaaaaccgcaacctcatcagaaaccgagatggattgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4868 ctgataacggatttaacccaacaaaaccgcaacctcatcagaaaccgagatggattgtgt 4809
Query: 365 atgctacctccacagaagacgtaagtactgttatgaagatcatcaataaatataacatcc 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4808 atgctacctccacagaagacgtaagtgctgttatgaagatcatcaataaatataacatcc 4749
Query: 425 ctgttgtgcccttctctgggggtacttctctggaaggccacacatattccacacggccag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4748 ctgttgtgcccttctctgggggtacttctctggaaggccacacatattccacacggccag 4689
Query: 485 gtattgtcttgaacacttctaagatgaacaaaattttggctgtccaccataaggatttgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4688 gtattgtcttgaacacttctaagatgaacaaaattttggctgtccaccataaggatttgg 4629
Query: 545 atgctgtgctgcaggctggtgtgggatggcaacaattaaacgaatacttagcgagtgtgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4628 atgctgtgctgcaggctggtgtgggatggcaacaattaaacgaatacttagcgagtgtgc 4569
Query: 605 cagaatataaaaacatgatgttaggctgtgactgtggtcctggggctcacgtatgcggga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4568 cagaatataaaaacatgatgttaggctgtgactgtggtcctggggctcacgtatgcggga 4509
Query: 665 tggtcaatactaatgcttcaggtatcggagcaacaaggtatggatccatgggtgctaata 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4508 tggtcaatactaatgcttcaggtatcggagcaacaaggtatggatccatgggtgctaata 4449
Query: 725 tcatttctatcactgtcgtgttagctgatggtactgtggtcaagaccaaaaagagacctc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4448 tcatttctatcactgtcgtgttagctgatggtactgtggtcaagaccaaaaagagacctc 4389
Query: 785 gcaagttaagtgctggttataacttgacaggcctttttgtaggtagcgaaggcacgttag 844
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4388 gcaagtcaagtgctggttataacttgacaggcctttttgtaggtagcgaaggcacgttag 4329
Query: 845 gtatagttactgaagtgactgtaaaattacaagtgaggscaccatacgaaacagtggcag 904
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4328 gtatagttactgaagtgactgtaaaattacaagtgaggccaccatacgaaacagtggcag 4269
Query: 905 ttgttcaattccccactttaaaggactccacaaatactgtcgcmgaactcttcc-aaaag 963
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 4268 ttgttcaattccccactttaaaggactccacaaatactgtcgcagaactcttccaaaaag 4209
Query: 964 gtattca 970
|||||||
Sbjct: 4208 gtattca 4202
>3x_Contig1044
Length = 4552
Score = 419 bits (211), Expect = e-117
Identities = 213/214 (99%)
Strand = Plus / Plus
Query: 1 aggttttattctgtggaaagtaatggtaagaggataggaactagcacaaacgacaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 aggttttattctgtggaaagtaatggtaagaggataggaactagcacaaacgacaatggt 4396
Query: 61 gtaaggctttcccttgtttcgggtagtctaattgtcggaatcgggttgggattgatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 gtaaggctttcccttgtttcgggtagtctaattgtcggaatcgggttgggattgatatct 4456
Query: 121 tcaagttattttgtttcgaaaggggacaaacaggtgttcccattacagtctaccacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 tcaagttattttgtttcgaaaggggacaaacaggtgttcccattacagtctaccacacca 4516
Query: 181 ttaacagctttggatccgccaagatacggctcgg 214
||||||||||||||||||||||||||||| ||||
Sbjct: 4517 ttaacagctttggatccgccaagatacggntcgg 4550
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6110
Number of Sequences: 1807
Number of extensions: 6110
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)